Detecting genome structural variants with deep learning in single molecule sequencing
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Apr 9, 2025 - Python
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single-molecule-sequencing
Here are 18 public repositories matching this topic...
Sensitive and Fast Alignment Search Tool for Long Read sequencing Data.
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Jul 15, 2019 - C
Full-Length RNA Analysis pipeline developted by BGI RD group.
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Sep 2, 2022 - Perl
High accuracy single molecule Nanopore reads using the MrHAMER pipeline
bioinformatics nanopore hiv viral-genomics amplification nanopore-sequencing single-molecule-sequencing polisher viral-evolution medaka porechop racon
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May 12, 2021 - Python
Tools for working with single-molecule footprinting data
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Jan 9, 2026 - R
Preparatory demultiplex algorithms and HPC+Slurm solutions on BAM files for the ONT PGx workflow
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May 11, 2026 - Python
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May 11, 2026 - Nextflow
Useful tools for Full-Length RNA analysis.
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Feb 26, 2020
Preparatory FastQ extraction and alignment on per-sample BAM files for CypScope
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May 11, 2026 - Python
Org GitHub Page init
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May 17, 2026 - Python
Longevity sensing-and-intervention platform: biobutton wearables, perturb-seq screens, mtDNA biomarkers, and real-world data into a single longitudinal aging study.
epigenetics pharmacogenomics longevity single-molecule-sequencing grant-proposal athey-lab aging-biomarkers mitochondrial-biology inflammaging
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May 15, 2026 - Python
ONT Dorado basecaller Orchestration Pipeline
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May 11, 2026 - Python
Extremely fast and accurate Nanopore demultiplexing
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May 11, 2026 - Rust
The SMA-seq workflow for Oxford Nanopore Technology, in pure Python and SQLite database.
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May 13, 2026 - Python
Sequencing sample sheet generator for wet lab
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May 11, 2026 - HTML
💫 Toolkit to help you get started with Spec-Driven Development
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May 11, 2026 - Python
A benchmarking effort of various doraro models for the SMS pipeline
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May 11, 2026 - Python
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