Python CLI for querying and downloading RNA-Seq metadata from the EMBL-EBI ENA Portal by NCBI taxonomy ID. Supports tax_tree expansion, streaming TSV/JSON output, and robust retry/backoff for reliable large-scale transcriptomic data retrieval.
cli bioinformatics rna-seq ncbi-taxonomy transcriptomics cli-tool ena ena-portal research-tools metadata-retrieval ena-api
-
Updated
Mar 3, 2026 - Python