Skip to content
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
34 changes: 0 additions & 34 deletions .devcontainer/devcontainer.json

This file was deleted.

12 changes: 6 additions & 6 deletions .github/workflows/run-tests.yml
Original file line number Diff line number Diff line change
@@ -1,6 +1,8 @@
name: unit tests

on: [push, pull_request]
permissions:
contents: read

jobs:
test:
Expand All @@ -11,10 +13,6 @@ jobs:
python-version: ["3.12", "3.13", "3.14"]

steps:
- uses: awalsh128/cache-apt-pkgs-action@latest
with:
packages: freeglut3-dev
if: matrix.os == 'ubuntu-latest'
- uses: actions/checkout@v4
- name: Install uv
uses: astral-sh/setup-uv@v6
Expand All @@ -31,7 +29,6 @@ jobs:
uv run black . --check --diff --color
uv run ruff check
uv run py.test --mpl --mypy --cov src --cov-append --cov-report=term-missing --junitxml=junit.xml

- name: Store coverage results as artifacts
uses: actions/upload-artifact@v4
with:
Expand All @@ -40,9 +37,10 @@ jobs:
include-hidden-files: true
if: matrix.os == 'ubuntu-latest'
- name: Upload test results to Codecov
uses: codecov/test-results-action@v1
uses: codecov/codecov-action@v5
with:
token: ${{ secrets.CODECOV_TOKEN }}
report_type: test_results
if: ${{ !cancelled() && matrix.os == 'ubuntu-latest' }}

coverage-combine:
Expand All @@ -54,6 +52,8 @@ jobs:
- uses: actions/checkout@v4
- name: Install uv
uses: astral-sh/setup-uv@v6
with:
enable-cache: true
- name: Download coverage results
uses: actions/download-artifact@v4
with:
Expand Down
9 changes: 9 additions & 0 deletions docs/api/aimbat/_tui.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,9 @@
::: aimbat._tui
options:
heading_level: 1
toc_label: aimbat._tui
show_root_heading: true
show_root_toc_entry: true
inherited_members: true
show_submodules: true
summary: true
111 changes: 0 additions & 111 deletions flake.lock

This file was deleted.

62 changes: 0 additions & 62 deletions flake.nix

This file was deleted.

7 changes: 4 additions & 3 deletions pyproject.toml
Original file line number Diff line number Diff line change
Expand Up @@ -22,19 +22,20 @@ dependencies = [
"sqlmodel>=0.0.24",
"rich>=13.9.4",
"matplotlib>=3.10.6",
"pyside6>=6.9.2",
"pyqtgraph>=0.13.7",
"cyclopts>=3.24.0",
"pydantic-settings>=2.10.1",
"pandas>=3.0.1",
"pandas-stubs>=3.0.0.260204",
"textual>=8.0.0",
"textual-fspicker>=1.0.0",
]

[project.urls]
Documentation = "https://aimbat.pysmo.org"

[project.scripts]
aimbat = "aimbat.app:app"
aimbat-tui = "aimbat._tui.app:main"

[dependency-groups]
test = [
Expand All @@ -43,12 +44,12 @@ test = [
"pytest-dependency>=0.6.0",
"pytest-mpl>=0.17.0",
"pytest-mypy>=1.0.1",
"pytest-qt>=4.5.0",
"pytest-sugar>=1.1.1",
"ruff>=0.13.0",
]
dev = [
"black>=26.1.0",
"textual-dev>=1.8.0",
]
docs = [
"git-cliff>=2.12.0",
Expand Down
7 changes: 0 additions & 7 deletions src/aimbat/_cli/common.py
Original file line number Diff line number Diff line change
Expand Up @@ -25,13 +25,6 @@ def __post_init__(self) -> None:
configure_logging()


@Parameter(name="*")
@dataclass
class PlotParameters:
use_qt: bool = False
"Use pyqtgraph instead of matplotlib for plots (where applicable)."


@Parameter(name="*")
@dataclass
class IccsPlotParameters:
Expand Down
15 changes: 12 additions & 3 deletions src/aimbat/_cli/event.py
Original file line number Diff line number Diff line change
Expand Up @@ -118,22 +118,31 @@ def cli_event_parameter_get(
@simple_exception
def cli_event_parameter_set(
name: EventParameter,
value: Timedelta | str,
value: str,
*,
global_parameters: GlobalParameters = GlobalParameters(),
) -> None:
"""Set parameter value for the active event.

Args:
name: Event parameter name.
value: Event parameter value.
value: Event parameter value. For timedelta parameters, bare numbers
are interpreted as seconds.
"""
from aimbat.db import engine
from aimbat.core import set_event_parameter
from sqlmodel import Session

_TIMEDELTA_PARAMS = (EventParameter.WINDOW_PRE, EventParameter.WINDOW_POST)
parsed_value: Timedelta | str = value
if name in _TIMEDELTA_PARAMS:
try:
parsed_value = Timedelta(seconds=float(value))
except ValueError:
parsed_value = Timedelta(value)

with Session(engine) as session:
set_event_parameter(session, name, value)
set_event_parameter(session, name, parsed_value)


@parameter.command(name="dump")
Expand Down
10 changes: 9 additions & 1 deletion src/aimbat/_cli/pick.py
Original file line number Diff line number Diff line change
Expand Up @@ -41,6 +41,7 @@ def cli_update_phase_pick(
iccs_parameters.context,
iccs_parameters.all,
use_seismogram_image,
return_fig=False,
)


Expand Down Expand Up @@ -73,6 +74,7 @@ def cli_pick_timewindow(
iccs_parameters.context,
iccs_parameters.all,
use_seismogram_image,
return_fig=False,
)


Expand All @@ -95,7 +97,13 @@ def cli_pick_min_ccnorm(

with Session(engine) as session:
iccs = create_iccs_instance(session)
update_min_ccnorm(session, iccs, iccs_parameters.context, iccs_parameters.all)
update_min_ccnorm(
session,
iccs,
iccs_parameters.context,
iccs_parameters.all,
return_fig=False,
)


if __name__ == "__main__":
Expand Down
Loading