Repositories list

• globalbioticinteractions

  Public
  Global Biotic Interactions provides access to existing species interaction datasets

  bioinformaticsparasitesbiology+ 11

  bioinformaticsparasitesbiologydietecologybiodiversitydiseaseseoletl-frameworkfood-webs+ 4

  Java

  •

  GNU General Public License v3.0

  •1818 forks•142142 stars•408408 issues•11 pull request•Updated Apr 15, 2026Apr 15, 2026

• template-dataset

  Public template
  Template species interaction data repository compatible with globalbioticinteractions.org

  biologyspeciesinteractions+ 4

  biologyspeciesinteractionsecologyglobibioticglobalbioticinteractions

  2222 forks•88 stars•00 issues•00 pull requests•Updated Apr 14, 2026Apr 14, 2026

• name-alignment-template

  Public template
  align names with known taxonomic resources

  Creative Commons Zero v1.0 Universal

  •66 forks•44 stars•55 issues•00 pull requests•Updated Apr 14, 2026Apr 14, 2026

• life4pollinators

  Public
  GloBI index configuration associated with Barberis et al. (2025). Insect-flower interactions in the Mediterranean area: a Citizen Science dataset collated withi…

  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 10, 2026Apr 10, 2026

• nomer

  Public
  maps identifiers and names to other identifiers and names

  HTML

  •

  GNU General Public License v3.0

  •44 forks•2222 stars•7070 issues•00 pull requests•Updated Apr 7, 2026Apr 7, 2026

• taxon-graph-builder

  Public
  Builder for Global Biotic Interactions Taxon Graph

  Makefile

  •

  GNU General Public License v3.0

  •11 fork•00 stars•00 issues•00 pull requests•Updated Apr 7, 2026Apr 7, 2026

• homebrew-globi

  Public
  Formula to help install GloBI tools on Mac OS

  Ruby

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 7, 2026Apr 7, 2026

• globinizer

  Public
  Checks whether datasets are ready for GloBI indexing

  Shell

  •

  MIT License

  •22 forks•11 star•00 issues•00 pull requests•Updated Apr 7, 2026Apr 7, 2026

• globi-server-scripts

  Public
  bash scripts used for GloBI server

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 6, 2026Apr 6, 2026

• elton

  Public
  Access, review and index existing species interaction datasets

  Java

  •

  GNU General Public License v3.0

  •33 forks•55 stars•2121 issues•00 pull requests•Updated Apr 2, 2026Apr 2, 2026

• globalbioticinteractions.github.io

  Public
  source files for GloBI website

  HTML

  •

  MIT License

  •1414 forks•1010 stars•77 issues•1010 pull requests•Updated Mar 29, 2026Mar 29, 2026

• afromoths

  Public
  index configuration for De Prins, J., & De Prins, W. (2026). Afromoths, online database of Afrotropical moth species (Lepidoptera) (Version 2026-03-01). Belgian…

  00 forks•00 stars•00 issues•00 pull requests•Updated Mar 19, 2026Mar 19, 2026

• beefunc

  Public
  configuration for GloBI to index Aubouin, L., Genoud, D., Givord-Coupeau, B. et al. BeeFunc, a comprehensive trait database for French bees. Sci Data 12, 1302 (…

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 11, 2026Mar 11, 2026

• carvajal-quintero-2026

  Public
  configuration to help index Carvajal-Quintero, J.D. et al. 2026. Degradation of fish food webs in the Anthropocene. Science Advances. https://doi.org/10.1126/sc…

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 4, 2026Mar 4, 2026

• review-corpus-builder

  Public
  workflows to compile a data review corpus

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 26, 2026Feb 26, 2026

• hafer-hahmann-2026

  Public
  index configuration for Hafer-Hahmann N. The Evolution and Ecology of Host Manipulation in Helminth Parasites: A Phylogenetic Meta-Analysis. Ecol Lett. 2026 Feb…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 25, 2026Feb 25, 2026

• russo2022

  Public
  index configuration for Russo, Laura; Fitzpatrick, Una; Larkin, Michelle et al. (2022). Database of plant-flower visitor interactions from Ireland [Dataset]. Dr…

  TeX

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 19, 2026Feb 19, 2026

• bees-of-ireland

  Public
  index configuration for Úna Fitzpatrick. 2025. Bees of Ireland. National Biodiversity Data Centre. https://maps.biodiversityireland.ie/Dataset/5 https://gbif.bi…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 18, 2026Feb 18, 2026

• syrphids-of-ireland

  Public
  index configuration for Martin Speight, M. and Gittings, T.. 2025. Data on the distribution of Irish hoverflies. National Biodiversity Data Centre. https://maps…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 13, 2026Feb 13, 2026

• knowledgepixels

  Public
  Configuration to enable GloBI indexing of species interactions published via knowledgepixel nanopubs and pensoft Biodiversity Data Journal

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 5, 2026Feb 5, 2026

• emec

  Public
  00 forks•00 stars•22 issues•00 pull requests•Updated Feb 4, 2026Feb 4, 2026

• lacm-lacmec

  Public
  00 forks•00 stars•11 issue•00 pull requests•Updated Feb 4, 2026Feb 4, 2026

• pozsgai2021

  Public
  Configuration to let GloBI index data associated with Pozsgai, G., Ben Fekih, I., Kohnen, M.V. et al. Associations between carabid beetles and fungi in the ligh…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 4, 2026Feb 4, 2026

• wood2015

  Public
  Discover data in Wood SA, Russell R, Hanson D, Williams RJ, Dunne JA (2015) Data from: Effects of spatial scale of sampling on food web structure. Dryad Digital…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 4, 2026Feb 4, 2026

• wardeh2015

  Public
  00 forks•00 stars•11 issue•00 pull requests•Updated Feb 4, 2026Feb 4, 2026

• seinet

  Public
  GloBI config to index Southwest Environmental Information Network (SEINet)

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 4, 2026Feb 4, 2026

• darkcides

  Public
  Configuration for GloBI to index Tanalgo, Krizler; Tabora, John Aries G.; Oliveira, Hernani Fernandes Magalhães; Haelewaters, Danny; Beranek, Chad T.; Otálora-A…

  00 forks•00 stars•11 issue•00 pull requests•Updated Feb 3, 2026Feb 3, 2026

• boreux2019

  Public
  index configuration for Boreux, Virginie; Klein, Alexandra-Maria (2019). Global pollinator database. figshare. Dataset. https://doi.org/10.6084/m9.figshare.9980…

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 3, 2026Feb 3, 2026

• ferrer-paris

  Public
  Dataset extracted from Ferrer-Paris et al. 2014

  00 forks•00 stars•00 issues•00 pull requests•Updated Feb 3, 2026Feb 3, 2026

• usda-fungus-host

  Public
  configuration to help index Farr, David F.; Rossman, Amy Y.; Castlebury, Lisa A. (2021). United States National Fungus Collections Fungus-Host Dataset. Ag Data …

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 28, 2026Jan 28, 2026