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[ DO NOT MERGE ] - Add side quest for lineage training#964

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[ DO NOT MERGE ] - Add side quest for lineage training#964
luisas wants to merge 2 commits into
nextflow-io:masterfrom
luisas:lineage_training

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@luisas

@luisas luisas commented Jun 15, 2026

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Summary

Adds a new side quest covering Nextflow's data lineage feature.

  • New side quest at docs/en/docs/side_quests/lineage/index.md (785 lines) covering:
    • Enabling lineage tracking via lineage.enabled = true in nextflow.config
    • Exploring records with the nextflow lineage CLI (list, view, find, render, diff)
    • The three record types: WorkflowRun, TaskRun, and FileOutput
    • Why the output {} block is required for file-level provenance tracking
    • Comparing two workflow runs with nextflow lineage diff
  • Example Nextflow pipeline in side-quests/lineage/ (same Hello Nextflow logic, extended with output {} and lineage config) including pre-generated .lineage/ store for reference
  • Added lineage side quest entry to docs/en/docs/side_quests/index.md and mkdocs.yml nav

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@luisas luisas marked this pull request as draft June 15, 2026 10:36
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