Skip to content

Navigation Menu

Appearance settings

View all features
- BY COMPANY SIZE
  Enterprises
  Small and medium teams
  Startups
  Nonprofits
- BY USE CASE
  App Modernization
  DevSecOps
  DevOps
  CI/CD
  View all use cases
- BY INDUSTRY
  Healthcare
  Financial services
  Manufacturing
  Government
  View all industries
View all solutions
- EXPLORE BY TOPIC
  AI
  Software Development
  DevOps
  Security
  View all topics
- EXPLORE BY TYPE
  Customer stories
  Events & webinars
  Ebooks & reports
  Business insights
  GitHub Skills
- SUPPORT & SERVICES
  Documentation
  Customer support
  Community forum
  Trust center
  Partners
View all resources
- COMMUNITY
  GitHub SponsorsFund open source developers
- PROGRAMS
  Security Lab
  Maintainer Community
  Accelerator
  Archive Program
- REPOSITORIES
  Topics
  Trending
  Collections
- ENTERPRISE SOLUTIONS
  Enterprise platformAI-powered developer platform
- AVAILABLE ADD-ONS
  GitHub Advanced SecurityEnterprise-grade security features
  Copilot for BusinessEnterprise-grade AI features
  Premium SupportEnterprise-grade 24/7 support
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

bhklab / med-imagetools Public

Notifications You must be signed in to change notification settings
Fork 10
Star 56

Code
Issues 29
Pull requests 6
Discussions
Actions
Projects
Security
Insights

Additional navigation options

Code
Issues
Pull requests
Discussions
Actions
Projects
Security
Insights

Pull requests: bhklab/med-imagetools

Labels 14 Milestones 0

Labels 14 Milestones 0

New pull request New

6 Open 278 Closed

6 Open 278 Closed

Author

Filter by author

Loading

Uh oh!

There was an error while loading. Please reload this page.

Label

Filter by label

Loading

Uh oh!

There was an error while loading. Please reload this page.

Use alt + click/return to exclude labels

or ⇧ + click/return for logical OR

Projects

Filter by project

Loading

Uh oh!

There was an error while loading. Please reload this page.

Milestones

Filter by milestone

Loading

Uh oh!

There was an error while loading. Please reload this page.

Reviews

Filter by reviews

No reviews Review required Approved review Changes requested

Assignee

Filter by who’s assigned

Assigned to nobody

Loading

Uh oh!

There was an error while loading. Please reload this page.

Sort

Sort by

Newest Oldest Most commented Least commented Recently updated Least recently updated Best match

Most reactions

Pull requests list

feat: add niftiindex command for indexing NIfTI and NRRD images

#438 opened Feb 25, 2026 by JoshuaSiraj

Loading…

feat: add crawl_directory option to autopipeline and nnunet_pipeline

#437 opened Feb 24, 2026 by JoshuaSiraj

Loading…

1

feat: add dry run functionality to autopipeline and add sensitive dicom tags to metadata hackathon

#430 opened Nov 25, 2025 by JoshuaSiraj

Loading…

fix: transactional savings in Autopipeline & nnUNetPipeline hackathon

#415 opened Aug 13, 2025 by ArmanJR

Loading…

3

test: add nnunet pipeline tests hackathon

#395 opened Jun 16, 2025 by JoshuaSiraj

Loading…

9

feat: implement vector mask bit shifting to create Region Mask

#345 opened Apr 30, 2025 by jjjermiah • Draft

6

ProTip! Updated in the last three days: updated:>2026-02-24.

Footer

© 2026 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Community
Docs
Contact

You can’t perform that action at this time.