Use LaTeX rendering for equations in docs by Copilot · Pull Request #383 · AlgebraicJulia/Decapodes.jl

Copilot · 2026-05-04T19:27:50Z

DiagrammaticEquations v0.2.6 added @decapode_latex for LaTeX rendering of equations. Replace to_graphviz calls for individual component equations across the docs with this new rendering method. Pedagogical examples that demonstrate the ACSet table/graph structure are preserved.

Changes

overview/overview.md — Replace Diffusion/Advection/Superposition component displays in "Merging Multiple Physics"; keep graph-structure pedagogy (Variable, TwoVariables, Equation, triangle diagram)
ice_dynamics/ice_dynamics.md, cism/cism.md — Replace halfar_eq2 and glens_law component displays; keep composed/resolved results
nhs/nhs_lite.md — Replace momentum, tracer_conservation, equation_of_state, isotropic_diffusivity displays; keep isotropic_tracer and isotropic_nonhydrostatic_buoyancy (composed results)
ch/cahn-hilliard.md, bsh/budyko_sellers_halfar.md, halmo/halmo.md, bc/bc_debug.md — Replace single-component equation displays
klausmeier/klausmeier.md, fokker_planck/fokker_planck.md — Add @decapode_latex for component equations that were previously hidden (nothing # hide)
pconv/porous_convection.md — Add @decapode_latex block for original equations before infer_types!/resolve_overloads!; keep to_graphviz for the resolved form

Pattern

For each replaced call, the equation body is duplicated into a @decapode_latex block (required since the macro takes an expression, not a Decapode object):

halfar_eq2 = @decapode begin        # ← used by gensim/oapply downstream
  h::Form0
  Γ::Form0
  n::Constant
  ḣ == ∂ₜ(h)
  ḣ == Γ * ∘(⋆, d, ⋆)(d(h) ∧₁₀ ((mag(♯ᵖᵖ(d(h)))^(n-1)) ∧₀₀ h^(n+2)))
end

@decapode_latex begin               # ← renders as LaTeX in docs
  h::Form0
  Γ::Form0
  n::Constant
  ḣ == ∂ₜ(h)
  ḣ == Γ * ∘(⋆, d, ⋆)(d(h) ∧₁₀ ((mag(♯ᵖᵖ(d(h)))^(n-1)) ∧₀₀ h^(n+2)))
end

Warning

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lukem12345 · 2026-05-04T20:01:19Z

I'll put a pin on this PR for now. It will take some back and forth to decide what the right amount of code duplication is for pedagogical purposes.

Initial plan

a38916e

Copilot AI assigned Copilot and lukem12345 May 4, 2026

Copilot started work on behalf of lukem12345 May 4, 2026 19:27 View session

Copilot AI linked an issue May 4, 2026 that may be closed by this pull request

Use LaTeX rendering for equations #382

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Replace to_graphviz with @decapode_latex for component equations in docs

11c74be

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Copilot AI changed the title ~~[WIP] Update Decapodes docs for LaTeX rendering of equations~~ Use LaTeX rendering for equations in docs May 4, 2026

Copilot finished work on behalf of lukem12345 May 4, 2026 19:58

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Use LaTeX rendering for equations in docs#383

Use LaTeX rendering for equations in docs#383
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Copilot AI commented May 4, 2026 •

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